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Working Groups
Data Structures
Infrastructure
Bioinformatics Pipelines and Visualization
Ethics and Data Sharing
Training and Workforce Development
Data Repositories
Join a Working Group
Activities
Sub-Awards
Courses, Workshops and Training
SARS-CoV-2
Other Pathogens
Ethics & Data Governance
Ethics and Data Sharing Forum
About PHA4GE
Organizational Structure
PHA4GE Membership
Sustainability
Support Us
Contact
Research Hub
Articles
Newsletters
Meetings and Conferences
Courses, Workshops and Training
Resources
Webinars
Videos
Support Us
Mandela Day 2024
Resources
SARS-CoV-2
Resources
Proposed Standards for Public Health Bioinformatics Software
Proposed Standards for Public Health Bioinformatics Software
Identifying SARS-CoV-2 Recombinants
Identifying SARS-CoV-2 Recombinants
COVID-19 analysis – Galaxy
COVID-19 analysis – Galaxy
SARS CoV-2 Sequencing – Centers for Disease Control and Prevention, USA
SARS CoV-2 Sequencing – Centers for Disease Control and Prevention, USA
COVID-19 Metadata Standard (template)
COVID-19 Metadata Standard (template)
Bioinformatics Solutions for SARS-CoV-2 Genomic Analysis
Bioinformatics Solutions for SARS-CoV-2 Genomic Analysis
Omicron (B.1.1.529; 21K) Variant Resources
Omicron (B.1.1.529; 21K) Variant Resources
Future-proofing and maximizing the utility of metadata: The PHA4GE SARS-CoV-2 contextual data specification package
Future-proofing and maximizing the utility of metadata: The PHA4GE SARS-CoV-2 contextual data specification package
Quality Control Solutions for SARS-CoV-2 Genomic Analysis
Quality Control Solutions for SARS-CoV-2 Genomic Analysis
Articles
Accelerating genomics-based surveillance for COVID-19 response in Africa – NCBI
Accelerating genomics-based surveillance for COVID-19 response in Africa – NCBI
SA’s first SARS-COV-2 genome sequence and analysis – NRF South Africa
SA’s first SARS-COV-2 genome sequence and analysis – NRF South Africa
A genomics network established to respond rapidly to public health threats in South Africa – NCBI
A genomics network established to respond rapidly to public health threats in South Africa – NCBI
COVID-19 genome sequencing laboratory network launches in Africa – Africa CDC
COVID-19 genome sequencing laboratory network launches in Africa – Africa CDC
Presentations
The role of pathogen genomics in COVID-19 outbreak response
The role of pathogen genomics in COVID-19 outbreak response
Podcasts
SARS-CoV-2 contextual data specification for open genomic epidemiology – Micro Binfie Podcast
SARS-CoV-2 contextual data specification for open genomic epidemiology – Micro Binfie Podcast
